Xanthomonas vesicatoria strain LM159

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vesicatoria strain LM159 is a rod-shaped bacterium known for its pathogenicity in plants, particularly affecting Solanum lycopersicum, commonly known as tomato. This strain possesses flagella, which contribute to its motility and ability to infect host plants. The genome of Xanthomonas vesicatoria strain LM159 contains three replicons, indicating a complex genetic structure that may aid in its adaptability and virulence. This strain is primarily associated with the development of bacterial spot disease in tomato plants, which can lead to significant agricultural losses. The presence of multiple accessions, specifically NZ_CP018468.1, NZ_CP018470.1, and NZ_CP018471.1, highlights the genetic diversity within the strain and suggests the potential for varying levels of pathogenicity or resistance to control measures. The study of such traits is crucial for developing effective management strategies against bacterial spot disease in tomatoes. Understanding the specific interactions between Xanthomonas vesicatoria strain LM159 and its host, Solanum lycopersicum, can provide insights into the mechanisms of plant-pathogen interactions and the ecological impacts of bacterial diseases in agricultural systems. This knowledge is essential for informing breeding programs aimed at enhancing resistance in tomato cultivars, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vesicatoria
Strainstrain LM159

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vesicatoria strain LM159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete

Gene Summary

Adenine Count

41673 bp

Thymine Count

40862 bp

Guanine Count

59178 bp

Cytosine Count

59720 bp

Genome Length

201433 bp

Protein-coding Genes

199 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseBI313_RS15100Not AvailableNegative3179608 - 318042329894.1
5s ribosomal rnaNot AvailableNot AvailablePositive3180759 - 3180873Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive3181044 - 3183924Not Available
Trna-ileNot AvailableNot AvailablePositive3184153 - 3184229Not Available
Trna-alaNot AvailableNot AvailablePositive3184249 - 3184324Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive3184417 - 3185963Not Available
benzoate/h(+) symporter bene family transporterBI313_RS15130Not AvailablePositive3186851 - 318802640389.3
bacteriophytochrome bphpBI313_RS15135Not AvailableNegative3188236 - 319014070263.6
biliverdin-producing heme oxygenaseBI313_RS15140Not AvailableNegative3190137 - 319073021791.9
tcr/tet family mfs transporterBI313_RS15145Not AvailableNegative3190830 - 319209544338.1

Displaying genes 2971 – 2980 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total