Xanthomonas vesicatoria strain LM159

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vesicatoria strain LM159 is a rod-shaped bacterium known for its pathogenicity in plants, particularly affecting Solanum lycopersicum, commonly known as tomato. This strain possesses flagella, which contribute to its motility and ability to infect host plants. The genome of Xanthomonas vesicatoria strain LM159 contains three replicons, indicating a complex genetic structure that may aid in its adaptability and virulence. This strain is primarily associated with the development of bacterial spot disease in tomato plants, which can lead to significant agricultural losses. The presence of multiple accessions, specifically NZ_CP018468.1, NZ_CP018470.1, and NZ_CP018471.1, highlights the genetic diversity within the strain and suggests the potential for varying levels of pathogenicity or resistance to control measures. The study of such traits is crucial for developing effective management strategies against bacterial spot disease in tomatoes. Understanding the specific interactions between Xanthomonas vesicatoria strain LM159 and its host, Solanum lycopersicum, can provide insights into the mechanisms of plant-pathogen interactions and the ecological impacts of bacterial diseases in agricultural systems. This knowledge is essential for informing breeding programs aimed at enhancing resistance in tomato cultivars, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vesicatoria
Strainstrain LM159

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vesicatoria strain LM159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete

Gene Summary

Adenine Count

41673 bp

Thymine Count

40862 bp

Guanine Count

59178 bp

Cytosine Count

59720 bp

Genome Length

201433 bp

Protein-coding Genes

199 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin transmembrane helix small proteinBI313_RS13300Not AvailablePositive2736382 - 27366007980.14
cytochrome c oxidase subunit 3BI313_RS13305Not AvailableNegative2736696 - 273757132557.8
cytochrome c oxidase assembly proteinBI313_RS13310Not AvailableNegative2737609 - 273820521222.5
hypothetical proteinBI313_RS13315Not AvailableNegative2738202 - 27383756029.39
cytochrome c oxidase subunit iBI313_RS13320Not AvailableNegative2738356 - 273996059316.6
cytochrome c oxidase subunit iiBI313_RS13325Not AvailableNegative2740002 - 274095534509.6
duf2244 domain-containing proteinBI313_RS13330Not AvailableNegative2740972 - 274144817451.4
bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase putaBI313_RS13335Not AvailablePositive2741728 - 2744928114328.0
5s ribosomal rnaNot AvailableNot AvailablePositive2745535 - 2745649Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2745820 - 2748700Not Available

Displaying genes 2621 – 2630 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total