Xanthomonas vesicatoria strain LM159

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vesicatoria strain LM159 is a rod-shaped bacterium known for its pathogenicity in plants, particularly affecting Solanum lycopersicum, commonly known as tomato. This strain possesses flagella, which contribute to its motility and ability to infect host plants. The genome of Xanthomonas vesicatoria strain LM159 contains three replicons, indicating a complex genetic structure that may aid in its adaptability and virulence. This strain is primarily associated with the development of bacterial spot disease in tomato plants, which can lead to significant agricultural losses. The presence of multiple accessions, specifically NZ_CP018468.1, NZ_CP018470.1, and NZ_CP018471.1, highlights the genetic diversity within the strain and suggests the potential for varying levels of pathogenicity or resistance to control measures. The study of such traits is crucial for developing effective management strategies against bacterial spot disease in tomatoes. Understanding the specific interactions between Xanthomonas vesicatoria strain LM159 and its host, Solanum lycopersicum, can provide insights into the mechanisms of plant-pathogen interactions and the ecological impacts of bacterial diseases in agricultural systems. This knowledge is essential for informing breeding programs aimed at enhancing resistance in tomato cultivars, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vesicatoria
Strainstrain LM159

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vesicatoria strain LM159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete

Gene Summary

Adenine Count

41673 bp

Thymine Count

40862 bp

Guanine Count

59178 bp

Cytosine Count

59720 bp

Genome Length

201433 bp

Protein-coding Genes

199 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoglutarate-dependent dioxygenase alkb family proteinBI313_RS11665Not AvailableNegative2392017 - 239261622393.7
electron transfer flavoprotein-ubiquinone oxidoreductaseBI313_RS11670Not AvailablePositive2392742 - 239439159566.9
coa transferase subunit bBI313_RS11675Not AvailableNegative2394423 - 239505522119.7
coa transferase subunit aBI313_RS11680Not AvailableNegative2395055 - 239578625982.0
phosphomannomutase/phosphoglucomutaseBI313_RS11685Not AvailablePositive2395922 - 239726848965.1
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseBI313_RS11690Not AvailablePositive2397318 - 239872150936.4
nucleotide sugar dehydrogenaseBI313_RS11695Not AvailableNegative2399019 - 240018542963.6
dtdp-4-dehydrorhamnose reductaseBI313_RS11700Not AvailableNegative2400521 - 240142032244.0
dtdp-4-dehydrorhamnose 3,5-epimeraseBI313_RS11705Not AvailableNegative2401417 - 240197420305.0
glucose-1-phosphate thymidylyltransferase rfbaBI313_RS11710Not AvailableNegative2401971 - 240285832621.9

Displaying genes 2301 – 2310 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total