Xanthomonas vesicatoria strain LM159

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vesicatoria strain LM159 is a rod-shaped bacterium known for its pathogenicity in plants, particularly affecting Solanum lycopersicum, commonly known as tomato. This strain possesses flagella, which contribute to its motility and ability to infect host plants. The genome of Xanthomonas vesicatoria strain LM159 contains three replicons, indicating a complex genetic structure that may aid in its adaptability and virulence. This strain is primarily associated with the development of bacterial spot disease in tomato plants, which can lead to significant agricultural losses. The presence of multiple accessions, specifically NZ_CP018468.1, NZ_CP018470.1, and NZ_CP018471.1, highlights the genetic diversity within the strain and suggests the potential for varying levels of pathogenicity or resistance to control measures. The study of such traits is crucial for developing effective management strategies against bacterial spot disease in tomatoes. Understanding the specific interactions between Xanthomonas vesicatoria strain LM159 and its host, Solanum lycopersicum, can provide insights into the mechanisms of plant-pathogen interactions and the ecological impacts of bacterial diseases in agricultural systems. This knowledge is essential for informing breeding programs aimed at enhancing resistance in tomato cultivars, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vesicatoria
Strainstrain LM159

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vesicatoria strain LM159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete

Gene Summary

Adenine Count

41673 bp

Thymine Count

40862 bp

Guanine Count

59178 bp

Cytosine Count

59720 bp

Genome Length

201433 bp

Protein-coding Genes

199 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-l-isoaspartate o-methyltransferase family proteinBI313_RS11210Not AvailablePositive2287191 - 228784724088.1
tolc family outer membrane proteinBI313_RS11215Not AvailablePositive2287868 - 228926250222.8
hypothetical proteinBI313_RS24455Not AvailableNegative2289573 - 22897194828.45
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseBI313_RS11225Not AvailableNegative2289886 - 229120248631.8
lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferaseBI313_RS11230Not AvailablePositive2291279 - 229219934835.4
o-antigen ligase family proteinBI313_RS11235Not AvailableNegative2292282 - 229361647026.7
glycosyltransferaseBI313_RS11240Not AvailableNegative2293597 - 229470939907.5
zinc-finger domain-containing proteinBI313_RS11245Not AvailableNegative2294720 - 22949177149.48
gh92 family glycosyl hydrolaseBI313_RS11250Not AvailablePositive2295641 - 2298967120065.0
nadp-dependent malic enzymeBI313_RS11255Not AvailableNegative2299136 - 230144583692.3

Displaying genes 2211 – 2220 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total