Xanthomonas vesicatoria strain LM159

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas vesicatoria strain LM159 is a rod-shaped bacterium known for its pathogenicity in plants, particularly affecting Solanum lycopersicum, commonly known as tomato. This strain possesses flagella, which contribute to its motility and ability to infect host plants. The genome of Xanthomonas vesicatoria strain LM159 contains three replicons, indicating a complex genetic structure that may aid in its adaptability and virulence. This strain is primarily associated with the development of bacterial spot disease in tomato plants, which can lead to significant agricultural losses. The presence of multiple accessions, specifically NZ_CP018468.1, NZ_CP018470.1, and NZ_CP018471.1, highlights the genetic diversity within the strain and suggests the potential for varying levels of pathogenicity or resistance to control measures. The study of such traits is crucial for developing effective management strategies against bacterial spot disease in tomatoes. Understanding the specific interactions between Xanthomonas vesicatoria strain LM159 and its host, Solanum lycopersicum, can provide insights into the mechanisms of plant-pathogen interactions and the ecological impacts of bacterial diseases in agricultural systems. This knowledge is essential for informing breeding programs aimed at enhancing resistance in tomato cultivars, ultimately contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas vesicatoria
Strainstrain LM159

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas vesicatoria strain LM159
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas vesicatoria strain LM159 plasmid pLM159.1, complete

Gene Summary

Adenine Count

41673 bp

Thymine Count

40862 bp

Guanine Count

59178 bp

Cytosine Count

59720 bp

Genome Length

201433 bp

Protein-coding Genes

199 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4097 family beta strand repeat-containing proteinBI313_RS08045Not AvailableNegative1531817 - 153276634480.1
aldehyde dehydrogenase iron-sulfur subunit paoaBI313_RS08050Not AvailableNegative1532763 - 153340422559.1
zinc-dependent alcohol dehydrogenase family proteinBI313_RS08055Not AvailableNegative1533803 - 153481034879.8
duf4097 family beta strand repeat-containing proteinBI313_RS08060Not AvailablePositive1535119 - 153660353762.6
single-stranded dna-binding proteinBI313_RS08065Not AvailableNegative1536760 - 153730819367.5
polyprenyl synthetase family proteinBI313_RS08070Not AvailablePositive1537580 - 153857835576.5
dienelactone hydrolase family proteinBI313_RS08075Not AvailableNegative1538755 - 153955527815.2
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseBI313_RS08080Not AvailableNegative1539725 - 154113449759.4
udp-n-acetyl-alpha-d-muramoyl-l-alanyl-l- glutamate epimeraseBI313_RS08085Not AvailableNegative1541115 - 154247049232.0
hypothetical proteinBI313_RS08090Not AvailableNegative1542467 - 154292516390.7

Displaying genes 1581 – 1590 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519

Displaying health effects 1 – 1 of 1 in total