Vibrio mediterranei strain QT6D1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei strain QT6D1 is a bacterium isolated from the Sundarbans Forest, specifically within the Sundarbans mangrove ecosystem. This strain is characterized by having two replicons, which indicates a complex genomic architecture that can potentially contribute to its adaptability in a fluctuating environment. The genome of Vibrio mediterranei strain QT6D1 is cataloged under two accession numbers: NZ_CP018308.1 and NZ_CP018310.1. These genomic sequences can provide insights into the genetic mechanisms that enable the bacterium to thrive in its unique habitat, characterized by brackish water and diverse microbial communities. Ecologically, the presence of Vibrio mediterranei in the Sundarbans mangrove highlights the significance of such environments as reservoirs of microbial diversity. Mangroves are known for their intricate interactions between land and sea, and the bacteria residing within these ecosystems play a crucial role in biogeochemical cycles. The adaptability and resilience of Vibrio mediterranei may contribute to nutrient cycling and the overall health of the mangrove ecosystem, emphasizing the importance of preserving such habitats for both microbial biodiversity and ecological stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strainstrain QT6D1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei strain QT6D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain QT6D1 chromosome 1, complete sequence.

Gene Summary

Adenine Count

1003199 bp

Thymine Count

1003893 bp

Guanine Count

802200 bp

Cytosine Count

804495 bp

Genome Length

3613787 bp

Protein-coding Genes

3224 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yche family naat transporterBSZ05_RS01275Not AvailablePositive283860 - 28449822492.4
ion transporterBSZ05_RS01280Not AvailablePositive284642 - 28548731423.9
aspartate-semialdehyde dehydrogenaseBSZ05_RS01285Not AvailableNegative285553 - 28667140389.8
chemotaxis proteinBSZ05_RS01290Not AvailableNegative286846 - 28804845256.2
hpt domain-containing proteinBSZ05_RS01295Not AvailableNegative288226 - 28953348653.1
nucleoid-associated protein yejkBSZ05_RS01300Not AvailableNegative289600 - 29059837312.7
yejl family proteinBSZ05_RS01305Not AvailablePositive290683 - 2909108080.58
duf3413 domain-containing proteinBSZ05_RS01310Not AvailablePositive290937 - 29276068982.2
Trna-proNot AvailableNot AvailablePositive292825 - 292900Not Available
Trna-serNot AvailableNot AvailablePositive293048 - 293138Not Available

Displaying genes 281 – 290 of 3452 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.