Vibrio mediterranei strain QT6D1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei strain QT6D1 is a bacterium isolated from the Sundarbans Forest, specifically within the Sundarbans mangrove ecosystem. This strain is characterized by having two replicons, which indicates a complex genomic architecture that can potentially contribute to its adaptability in a fluctuating environment. The genome of Vibrio mediterranei strain QT6D1 is cataloged under two accession numbers: NZ_CP018308.1 and NZ_CP018310.1. These genomic sequences can provide insights into the genetic mechanisms that enable the bacterium to thrive in its unique habitat, characterized by brackish water and diverse microbial communities. Ecologically, the presence of Vibrio mediterranei in the Sundarbans mangrove highlights the significance of such environments as reservoirs of microbial diversity. Mangroves are known for their intricate interactions between land and sea, and the bacteria residing within these ecosystems play a crucial role in biogeochemical cycles. The adaptability and resilience of Vibrio mediterranei may contribute to nutrient cycling and the overall health of the mangrove ecosystem, emphasizing the importance of preserving such habitats for both microbial biodiversity and ecological stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strainstrain QT6D1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei strain QT6D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain QT6D1 chromosome 1, complete sequence.

Gene Summary

Adenine Count

1003199 bp

Thymine Count

1003893 bp

Guanine Count

802200 bp

Cytosine Count

804495 bp

Genome Length

3613787 bp

Protein-coding Genes

3224 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosome partition protein mukeBSZ05_RS00775Not AvailableNegative168474 - 16921727896.2
chromosome partition protein mukfBSZ05_RS00780Not AvailableNegative169198 - 17053550828.9
trna uridine 5-oxyacetic acid(34) methyltransferase cmomBSZ05_RS00785Not AvailableNegative170547 - 17132629651.7
envelope biogenesis factor elycBSZ05_RS00790Not AvailablePositive171378 - 17233735448.1
two-component system response regulator torrBSZ05_RS00795Not AvailableNegative172449 - 17315927129.8
molecular chaperone tordBSZ05_RS00800Not AvailablePositive173440 - 17409324591.0
hth-type transcriptional repressor purrBSZ05_RS00805Not AvailablePositive174396 - 17540037359.1
tfox/sxy family dna transformation proteinBSZ05_RS00810Not AvailablePositive175783 - 17637322401.1
tvp38/tmem64 family proteinBSZ05_RS00815Not AvailablePositive176493 - 17717624551.7
duf2007 domain-containing proteinBSZ05_RS00820Not AvailablePositive177176 - 17751112600.8

Displaying genes 181 – 190 of 3452 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.