Vibrio mediterranei strain QT6D1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei strain QT6D1 is a bacterium isolated from the Sundarbans Forest, specifically within the Sundarbans mangrove ecosystem. This strain is characterized by having two replicons, which indicates a complex genomic architecture that can potentially contribute to its adaptability in a fluctuating environment. The genome of Vibrio mediterranei strain QT6D1 is cataloged under two accession numbers: NZ_CP018308.1 and NZ_CP018310.1. These genomic sequences can provide insights into the genetic mechanisms that enable the bacterium to thrive in its unique habitat, characterized by brackish water and diverse microbial communities. Ecologically, the presence of Vibrio mediterranei in the Sundarbans mangrove highlights the significance of such environments as reservoirs of microbial diversity. Mangroves are known for their intricate interactions between land and sea, and the bacteria residing within these ecosystems play a crucial role in biogeochemical cycles. The adaptability and resilience of Vibrio mediterranei may contribute to nutrient cycling and the overall health of the mangrove ecosystem, emphasizing the importance of preserving such habitats for both microbial biodiversity and ecological stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strainstrain QT6D1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei strain QT6D1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain QT6D1 chromosome 1, complete sequence.

Gene Summary

Adenine Count

1003199 bp

Thymine Count

1003893 bp

Guanine Count

802200 bp

Cytosine Count

804495 bp

Genome Length

3613787 bp

Protein-coding Genes

3224 genes

Non-Coding Genes

154 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2750 domain-containing proteinBSZ05_RS00475Not AvailableNegative100177 - 10056915387.9
manganese-dependent inorganic pyrophosphataseBSZ05_RS00480Not AvailableNegative100652 - 10155733139.9
putative manganese transporterBSZ05_RS00485Not AvailablePositive101766 - 10300744076.1
glycoside hydrolase family 36 proteinBSZ05_RS00490Not AvailableNegative103021 - 10476365860.4
trimethylamine-n-oxide reductase toraBSZ05_RS00495Not AvailableNegative104881 - 10734392356.3
pentaheme c-type cytochrome torcBSZ05_RS00500Not AvailableNegative107367 - 10854843901.8
trimethylamine n-oxide reductase system protein toreBSZ05_RS00505Not AvailableNegative108593 - 1087696469.01
abc transporter permeaseBSZ05_RS00510Not AvailablePositive109197 - 10999128809.7
hypothetical proteinBSZ05_RS00515Not AvailablePositive110247 - 1104598166.77
formate transporter focaBSZ05_RS00520Not AvailableNegative110456 - 11129830464.1

Displaying genes 121 – 130 of 3452 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.