Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS04850 | Not Available | Positive | 972168 - 972599 | 15796.8 |
| excinuclease abc subunit uvrb | BST98_RS04855 | Not Available | Positive | 972798 - 974825 | 76686.5 |
| quorum-sensing sigma-54 dependent transcriptional regulator luxo | BST98_RS04860 | Not Available | Positive | 975173 - 976612 | 52789.1 |
| hpt domain-containing protein | BST98_RS04865 | Not Available | Positive | 976625 - 976984 | 13275.8 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | BST98_RS04870 | Not Available | Negative | 976949 - 977842 | 32252.8 |
| lon peptidase substrate-binding domain-containing protein | BST98_RS04875 | Not Available | Negative | 978005 - 978580 | 22542.2 |
| hypothetical protein | BST98_RS04880 | Not Available | Negative | 978701 - 978928 | 8345.95 |
| gtp 3',8-cyclase moaa | BST98_RS04885 | Not Available | Positive | 979237 - 980238 | 37636.2 |
| cyclic pyranopterin monophosphate synthase moac | BST98_RS04890 | Not Available | Positive | 980312 - 980791 | 17172.9 |
| molybdopterin synthase sulfur carrier subunit | BST98_RS04895 | Not Available | Positive | 980788 - 981033 | 8831.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

