Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS22490 | Not Available | Negative | 960416 - 962062 | 63165.2 |
| site-specific integrase | BST98_RS04800 | Not Available | Negative | 962052 - 963377 | 50409.1 |
| endonuclease iii | BST98_RS04805 | Not Available | Negative | 963484 - 964137 | 24466.7 |
| electron transport complex subunit e | BST98_RS04810 | Not Available | Negative | 964211 - 964897 | 24462.7 |
| electron transport complex subunit rsxg | BST98_RS04815 | Not Available | Negative | 964900 - 965532 | 22746.5 |
| electron transport complex subunit rsxd | BST98_RS04820 | Not Available | Negative | 965541 - 966599 | 38089.5 |
| electron transport complex subunit rsxc | BST98_RS04825 | Not Available | Negative | 966593 - 969151 | 92228.9 |
| electron transport complex subunit rsxb | BST98_RS04830 | Not Available | Negative | 969154 - 969732 | 20330.7 |
| electron transport complex subunit rsxa | BST98_RS04835 | Not Available | Negative | 969734 - 970315 | 20862.6 |
| dipeptidase pepe | BST98_RS04840 | Not Available | Positive | 970696 - 971433 | 26999.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

