Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein transport protein | BST98_RS04740 | Not Available | Negative | 944266 - 945510 | 45210.4 |
| ribonuclease t | BST98_RS04745 | Not Available | Negative | 945810 - 946475 | 24687.1 |
| flagellar protein moty | BST98_RS04750 | Not Available | Positive | 946646 - 947539 | 34165.0 |
| reverse transcriptase domain-containing protein | BST98_RS04755 | Not Available | Negative | 948246 - 949949 | 64126.6 |
| dead/deah box helicase | BST98_RS04760 | Not Available | Negative | 950655 - 952031 | 51581.1 |
| hypothetical protein | BST98_RS04765 | Not Available | Negative | 952025 - 952552 | 20287.4 |
| helix-turn-helix domain-containing protein | BST98_RS04770 | Not Available | Positive | 952654 - 952962 | 11410.7 |
| hypothetical protein | BST98_RS04775 | Not Available | Negative | 953430 - 957200 | 142940.0 |
| hypothetical protein | BST98_RS04785 | Not Available | Negative | 957668 - 958087 | 15860.1 |
| hypothetical protein | BST98_RS04790 | Not Available | Negative | 958077 - 960419 | 87897.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

