Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2989 domain-containing protein | BST98_RS04590 | Not Available | Negative | 906260 - 907111 | 33195.6 |
| yeac family protein | BST98_RS04595 | Not Available | Positive | 907314 - 907598 | 10819.0 |
| asparaginase | BST98_RS04600 | Not Available | Negative | 907675 - 908688 | 36906.5 |
| signal peptide peptidase sppa | BST98_RS04605 | Not Available | Negative | 908955 - 910808 | 67444.7 |
| nadph-dependent 2,4-dienoyl-coa reductase | BST98_RS04610 | Not Available | Positive | 911079 - 913091 | 73283.3 |
| nad(p)h nitroreductase | BST98_RS04615 | Not Available | Positive | 913157 - 913705 | 19700.8 |
| selenide, water dikinase seld | BST98_RS04620 | Not Available | Positive | 913906 - 914940 | 36321.6 |
| trna 2-selenouridine(34) synthase mnmh | BST98_RS04625 | Not Available | Positive | 914940 - 916034 | 41525.6 |
| glucosaminidase domain-containing protein | BST98_RS04630 | Not Available | Negative | 916128 - 916967 | 31509.9 |
| dna topoisomerase iii | BST98_RS04635 | Not Available | Positive | 917131 - 919119 | 73674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

