Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsbb | BST98_RS04540 | Not Available | Negative | 893390 - 893902 | 19492.1 |
| na(+)/h(+) antiporter nhab | BST98_RS04545 | Not Available | Negative | 894132 - 895721 | 57627.8 |
| fatty acid metabolism transcriptional regulator fadr | BST98_RS04550 | Not Available | Positive | 896318 - 897169 | 32794.2 |
| spovr family protein | BST98_RS04555 | Not Available | Negative | 897253 - 898782 | 60347.4 |
| yeah/yhbh family protein | BST98_RS04560 | Not Available | Negative | 898869 - 900140 | 48841.6 |
| prka family serine protein kinase | BST98_RS04565 | Not Available | Negative | 900191 - 902125 | 74384.1 |
| voc family protein | BST98_RS04570 | Not Available | Positive | 902786 - 903166 | 13569.4 |
| d-hexose-6-phosphate mutarotase | BST98_RS04575 | Not Available | Negative | 903256 - 904131 | 32528.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BST98_RS04580 | Not Available | Negative | 904457 - 905452 | 35205.8 |
| peptide-methionine (r)-s-oxide reductase msrb | BST98_RS04585 | Not Available | Positive | 905790 - 906185 | 14792.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

