Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2500 domain-containing protein | BST98_RS00405 | Not Available | Negative | 83401 - 83733 | 12682.5 |
| hypothetical protein | BST98_RS00410 | Not Available | Positive | 84068 - 84433 | 14321.4 |
| yech family metal-binding protein | BST98_RS00420 | Not Available | Positive | 85407 - 85649 | 9026.79 |
| duf1145 domain-containing protein | BST98_RS00425 | Not Available | Negative | 85723 - 85989 | 9973.06 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | BST98_RS00430 | Not Available | Negative | 85986 - 86594 | 22860.2 |
| signal recognition particle-docking protein ftsy | BST98_RS00435 | Not Available | Positive | 86679 - 88067 | 50362.2 |
| cell division atp-binding protein ftse | BST98_RS00440 | Not Available | Positive | 88071 - 88742 | 25013.5 |
| permease-like cell division protein ftsx | BST98_RS00445 | Not Available | Positive | 88729 - 89655 | 34117.1 |
| rna polymerase sigma factor rpoh | BST98_RS00450 | Not Available | Positive | 89801 - 90664 | 32845.9 |
| thiosulfate sulfurtransferase glpe | BST98_RS00455 | Not Available | Positive | 91238 - 91567 | 12345.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

