Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase i | BST98_RS04285 | Not Available | Positive | 833858 - 835072 | 42837.1 |
| nucleotide sugar dehydrogenase | BST98_RS04295 | Not Available | Positive | 836105 - 837271 | 43021.4 |
| 4-phosphoerythronate dehydrogenase | BST98_RS04300 | Not Available | Positive | 837438 - 838622 | 43150.9 |
| aspartate-semialdehyde dehydrogenase | BST98_RS04305 | Not Available | Positive | 838606 - 839619 | 37270.3 |
| fimv/hubp family polar landmark protein | BST98_RS04310 | Not Available | Positive | 839985 - 843920 | 144577.0 |
| pkd domain-containing protein | BST98_RS04315 | Not Available | Positive | 844209 - 845741 | 57516.6 |
| trna pseudouridine(38-40) synthase trua | BST98_RS04320 | Not Available | Positive | 845913 - 846698 | 29601.3 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | BST98_RS04325 | Not Available | Positive | 847122 - 848048 | 33902.1 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | BST98_RS04330 | Not Available | Positive | 848327 - 849595 | 45860.8 |
| cell division protein dedd | BST98_RS04335 | Not Available | Positive | 849649 - 850311 | 23891.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

