Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotyrosine protein phosphatase | BST98_RS04185 | Not Available | Positive | 809867 - 810310 | 16097.3 |
| four helix bundle protein | BST98_RS04190 | Not Available | Positive | 810397 - 810747 | 13329.3 |
| polysaccharide biosynthesis tyrosine autokinase | BST98_RS04195 | Not Available | Positive | 810878 - 813049 | 79429.1 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | BST98_RS04200 | Not Available | Positive | 813428 - 814444 | 37131.9 |
| duf6625 family protein | BST98_RS04205 | Not Available | Positive | 814434 - 815378 | 37498.4 |
| glycosyltransferase family 2 protein | BST98_RS04210 | Not Available | Positive | 815381 - 816364 | 38478.2 |
| oligosaccharide flippase family protein | BST98_RS04215 | Not Available | Positive | 816358 - 817548 | 46162.0 |
| glycosyltransferase family 4 protein | BST98_RS04220 | Not Available | Positive | 817529 - 818605 | 40996.4 |
| hypothetical protein | BST98_RS04225 | Not Available | Positive | 818605 - 819753 | 44552.7 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BST98_RS04230 | Not Available | Positive | 819746 - 821161 | 52851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

