Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | BST98_RS04085 | Not Available | Negative | 790061 - 791269 | 46498.8 |
| trimeric intracellular cation channel family protein | BST98_RS04090 | Not Available | Negative | 791472 - 792107 | 22940.0 |
| hypothetical protein | BST98_RS04095 | Not Available | Positive | 792196 - 792492 | 11774.0 |
| elongation factor p hydroxylase | BST98_RS04100 | Not Available | Positive | 792670 - 793221 | 21290.0 |
| yfcl family protein | BST98_RS04105 | Not Available | Positive | 793244 - 793507 | 9635.19 |
| wzz/fepe/etk n-terminal domain-containing protein | BST98_RS04110 | Not Available | Positive | 793626 - 794648 | 39589.9 |
| hypothetical protein | BST98_RS04115 | Not Available | Positive | 794638 - 795714 | 42052.5 |
| glycerol-3-phosphate cytidylyltransferase | BST98_RS04120 | Not Available | Positive | 795733 - 796200 | 18037.6 |
| oligosaccharide flippase family protein | BST98_RS04125 | Not Available | Positive | 796211 - 797467 | 47526.3 |
| cdp-glycerol glycerophosphotransferase family protein | BST98_RS04130 | Not Available | Positive | 797454 - 798590 | 44676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

