Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | BST98_RS03980 | Not Available | Negative | 769444 - 771192 | 65873.3 |
| exodeoxyribonuclease iii | BST98_RS03985 | Not Available | Negative | 771403 - 772209 | 30964.8 |
| glsb/yeaq/ymge family stress response membrane protein | BST98_RS03990 | Not Available | Positive | 772673 - 772921 | 8423.63 |
| response regulator | BST98_RS03995 | Not Available | Negative | 773084 - 774736 | 63271.5 |
| Trna-tyr | Not Available | Not Available | Positive | 774884 - 774968 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 775065 - 775149 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 775246 - 775330 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 775427 - 775511 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 775608 - 775692 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 775789 - 775873 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

