Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 733006 - 733082 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 733122 - 733198 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 733384 - 733460 | Not Available |
| trab/gumn family protein | BST98_RS03840 | Not Available | Negative | 733710 - 734543 | 31104.3 |
| copper-translocating p-type atpase | BST98_RS03845 | Not Available | Negative | 734752 - 737640 | 102360.0 |
| cu(i)-responsive transcriptional regulator | BST98_RS03850 | Not Available | Positive | 737821 - 738216 | 14986.2 |
| hypothetical protein | BST98_RS03855 | Not Available | Negative | 738213 - 738650 | 16577.0 |
| winged helix-turn-helix domain-containing protein | BST98_RS03860 | Not Available | Negative | 738637 - 739302 | 25059.0 |
| ompa family protein | BST98_RS03865 | Not Available | Positive | 739973 - 740992 | 35734.6 |
| meta domain-containing protein | BST98_RS03870 | Not Available | Positive | 741184 - 741597 | 15112.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

