Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l36 | BST98_RS03220 | Not Available | Positive | 636571 - 636714 | 5484.96 |
| metq/nlpa family lipoprotein | BST98_RS03225 | Not Available | Negative | 636796 - 637620 | 29681.2 |
| methionine abc transporter permease | BST98_RS03230 | Not Available | Negative | 637689 - 638375 | 23877.3 |
| methionine abc transporter atp-binding protein metn | BST98_RS03235 | Not Available | Negative | 638365 - 639399 | 37652.9 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | BST98_RS03240 | Not Available | Positive | 639747 - 640301 | 20449.3 |
| abc transporter permease subunit | BST98_RS03245 | Not Available | Positive | 640541 - 641572 | 38256.2 |
| abc transporter permease | BST98_RS03250 | Not Available | Positive | 641569 - 642612 | 38985.6 |
| abc transporter atp-binding protein | BST98_RS03255 | Not Available | Positive | 642623 - 643510 | 33304.7 |
| atp-binding cassette domain-containing protein | BST98_RS03260 | Not Available | Positive | 643524 - 644354 | 31083.2 |
| extracellular solute-binding protein | BST98_RS03265 | Not Available | Positive | 644382 - 646208 | 70142.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

