Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase thih | BST98_RS00255 | Not Available | Positive | 51133 - 52245 | 42601.6 |
| aminopeptidase p family protein | BST98_RS00260 | Not Available | Negative | 52343 - 54133 | 65484.5 |
| multidrug effflux mfs transporter | BST98_RS00265 | Not Available | Positive | 54384 - 55586 | 42961.0 |
| dmt family transporter | BST98_RS00270 | Not Available | Negative | 55657 - 56556 | 32813.1 |
| dna recombination protein rmuc | BST98_RS00275 | Not Available | Positive | 56771 - 58297 | 58062.0 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | BST98_RS00280 | Not Available | Positive | 58420 - 59175 | 28137.8 |
| scp2 domain-containing protein | BST98_RS00285 | Not Available | Positive | 59184 - 59786 | 22221.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | BST98_RS00290 | Not Available | Positive | 59793 - 61430 | 63163.6 |
| sec-independent protein translocase subunit tata | BST98_RS00295 | Not Available | Positive | 61505 - 61765 | 9464.37 |
| sec-independent protein translocase protein tatb | BST98_RS00300 | Not Available | Positive | 61769 - 62116 | 12986.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

