Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit gamma | BST98_RS02910 | Not Available | Positive | 565119 - 568574 | 131507.0 |
| exodeoxyribonuclease v subunit beta | BST98_RS02915 | Not Available | Positive | 568868 - 572533 | 137528.0 |
| exodeoxyribonuclease v subunit alpha | BST98_RS02920 | Not Available | Positive | 572526 - 574649 | 77906.2 |
| duf302 domain-containing protein | BST98_RS02925 | Not Available | Positive | 574841 - 575275 | 16114.8 |
| amino-acid n-acetyltransferase | BST98_RS02930 | Not Available | Negative | 575286 - 576611 | 48993.5 |
| murein transglycosylase a | BST98_RS02935 | Not Available | Positive | 577026 - 578168 | 42449.7 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | BST98_RS02940 | Not Available | Positive | 578273 - 579076 | 29175.1 |
| hypothetical protein | BST98_RS22285 | Not Available | Negative | 579165 - 579341 | 6522.49 |
| hypothetical protein | BST98_RS02945 | Not Available | Positive | 579883 - 580278 | 14138.9 |
| hypothetical protein | BST98_RS02950 | Not Available | Positive | 580422 - 580700 | 10910.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

