Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 554104 - 554180 | Not Available |
| trimeric intracellular cation channel family protein | BST98_RS02865 | Not Available | Negative | 555182 - 555796 | 22552.5 |
| glutamate decarboxylase | BST98_RS02870 | Not Available | Negative | 555998 - 557398 | 52792.4 |
| glutaminase a | BST98_RS02875 | Not Available | Negative | 557410 - 558369 | 34482.0 |
| putative glutamine/gamma-aminobutyrate antiporter gadc | BST98_RS02880 | Not Available | Negative | 558380 - 559906 | 55248.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | BST98_RS02885 | Not Available | Negative | 560453 - 561484 | 36054.5 |
| yebg family protein | BST98_RS02890 | Not Available | Negative | 561820 - 562122 | 11162.3 |
| dna-3-methyladenine glycosylase i | BST98_RS02895 | Not Available | Positive | 562204 - 562893 | 26056.4 |
| lysr substrate-binding domain-containing protein | BST98_RS02900 | Not Available | Negative | 562890 - 563777 | 33995.8 |
| tdt family transporter | BST98_RS02905 | Not Available | Positive | 563931 - 564917 | 35642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

