Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | BST98_RS02510 | Not Available | Positive | 489503 - 490234 | 26529.9 |
| holo-acp synthase | BST98_RS02515 | Not Available | Positive | 490234 - 490614 | 13868.8 |
| two-component sensor histidine kinase bara | BST98_RS02520 | Not Available | Negative | 490728 - 493493 | 102861.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | BST98_RS02525 | Not Available | Positive | 493615 - 494940 | 49745.3 |
| gtp diphosphokinase | BST98_RS02530 | Not Available | Positive | 495003 - 497222 | 83980.4 |
| nucleoside triphosphate pyrophosphohydrolase | BST98_RS02535 | Not Available | Positive | 497288 - 498085 | 30678.4 |
| ctp synthase | BST98_RS02540 | Not Available | Positive | 498318 - 499958 | 60001.3 |
| phosphopyruvate hydratase | BST98_RS02545 | Not Available | Positive | 500042 - 501343 | 45845.6 |
| cell division protein ftsb | BST98_RS02550 | Not Available | Positive | 501647 - 501934 | 11034.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BST98_RS02555 | Not Available | Positive | 501977 - 502684 | 25044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

