Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 44324 - 44400 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 44410 - 44485 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 44540 - 44616 | Not Available |
| fluoride efflux transporter crcb | BST98_RS00220 | Not Available | Negative | 44898 - 45281 | 13572.2 |
| universal stress protein | BST98_RS00225 | Not Available | Positive | 45500 - 45922 | 15610.9 |
| phosphomethylpyrimidine synthase thic | BST98_RS00230 | Not Available | Positive | 46240 - 48168 | 72151.5 |
| thiamine phosphate synthase | BST98_RS00235 | Not Available | Positive | 48165 - 49412 | 46388.5 |
| hesa/moeb/thif family protein | BST98_RS00240 | Not Available | Positive | 49393 - 50178 | 28207.7 |
| sulfur carrier protein this | BST98_RS00245 | Not Available | Positive | 50162 - 50362 | 7449.96 |
| thiazole synthase | BST98_RS00250 | Not Available | Positive | 50364 - 51131 | 26709.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

