Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidative stress defense protein | BST98_RS02360 | Not Available | Positive | 465385 - 466113 | 26347.2 |
| phosphoglycerate dehydrogenase | BST98_RS02365 | Not Available | Negative | 466181 - 467410 | 44675.9 |
| ribose-5-phosphate isomerase rpia | BST98_RS02370 | Not Available | Negative | 467701 - 468360 | 23197.0 |
| 5-formyltetrahydrofolate cyclo-ligase | BST98_RS02375 | Not Available | Negative | 468562 - 469143 | 22519.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 469277 - 469459 | Not Available |
| cell division protein zapa | BST98_RS02385 | Not Available | Negative | 469468 - 469770 | 11303.5 |
| yeca family protein | BST98_RS02390 | Not Available | Positive | 470097 - 470672 | 20675.2 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | BST98_RS02395 | Not Available | Positive | 470716 - 471903 | 43215.8 |
| fad-dependent 2-octaprenylphenol hydroxylase | BST98_RS02400 | Not Available | Positive | 471906 - 473111 | 44362.7 |
| glycine cleavage system protein gcvh | BST98_RS02405 | Not Available | Positive | 473248 - 473634 | 13914.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

