Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 440145 - 440220 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 440278 - 440353 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 440406 - 440481 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 440522 - 440597 | Not Available |
| oxidative damage protection protein | BST98_RS02230 | Not Available | Negative | 440809 - 441081 | 10574.7 |
| a/g-specific adenine glycosylase | BST98_RS02235 | Not Available | Negative | 441195 - 442265 | 40533.7 |
| trna (guanosine(46)-n7)-methyltransferase trmb | BST98_RS02240 | Not Available | Positive | 442473 - 443210 | 27717.3 |
| glutaminase b | BST98_RS02245 | Not Available | Positive | 443329 - 444249 | 33021.9 |
| duf2884 family protein | BST98_RS02250 | Not Available | Positive | 444295 - 444699 | 15351.7 |
| radical sam family heme chaperone hemw | BST98_RS02255 | Not Available | Negative | 444774 - 445934 | 43438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

