Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BST98_RS20595 | Not Available | Positive | 1384712 - 1385665 | 35179.5 |
| abc transporter permease | BST98_RS20600 | Not Available | Positive | 1385662 - 1386459 | 29580.1 |
| atp-binding cassette domain-containing protein | BST98_RS20605 | Not Available | Positive | 1386446 - 1387141 | 25487.8 |
| atp-binding cassette domain-containing protein | BST98_RS20610 | Not Available | Positive | 1387134 - 1387730 | 22557.4 |
| hexose-6-phosphate:phosphate antiporter | BST98_RS20615 | Not Available | Negative | 1387802 - 1389202 | 50673.4 |
| acr3 family arsenite efflux transporter | BST98_RS20620 | Not Available | Negative | 1389515 - 1390594 | 39406.7 |
| arsr/smtb family transcription factor | BST98_RS20625 | Not Available | Negative | 1390733 - 1391077 | 12771.5 |
| amidohydrolase | BST98_RS20630 | Not Available | Positive | 1391355 - 1393172 | 66823.9 |
| hypothetical protein | BST98_RS20635 | Not Available | Negative | 1393244 - 1393630 | 14464.3 |
| type ii secretion system protein | BST98_RS22665 | Not Available | Negative | 1394098 - 1394637 | 19573.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

