Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BST98_RS20500 | Not Available | Positive | 1363703 - 1366180 | 91716.2 |
| hypothetical protein | BST98_RS20505 | Not Available | Negative | 1366241 - 1366600 | 13379.3 |
| hypothetical protein | BST98_RS20510 | Not Available | Negative | 1366818 - 1367645 | 30977.3 |
| hypothetical protein | BST98_RS20515 | Not Available | Negative | 1367629 - 1368099 | 18359.9 |
| hypothetical protein | BST98_RS20520 | Not Available | Negative | 1368133 - 1369998 | 68661.5 |
| arginine decarboxylase | BST98_RS20525 | Not Available | Positive | 1370869 - 1373166 | 85511.4 |
| sodium:solute symporter family protein | BST98_RS20530 | Not Available | Negative | 1373288 - 1374748 | 52543.8 |
| dmt family transporter | BST98_RS20535 | Not Available | Negative | 1374763 - 1375695 | 32629.8 |
| hypothetical protein | BST98_RS22470 | Not Available | Negative | 1375701 - 1375847 | 5158.12 |
| Trna-ser | Not Available | Not Available | Positive | 1376261 - 1376351 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

