Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS20450 | Not Available | Negative | 1353979 - 1354839 | 32580.4 |
| protein adenylyltransferase selo | BST98_RS20455 | Not Available | Negative | 1354921 - 1356396 | 56130.8 |
| class a beta-lactamase | BST98_RS20460 | Not Available | Positive | 1356594 - 1357460 | 31537.0 |
| feccd family abc transporter permease | BST98_RS20465 | Not Available | Positive | 1357648 - 1358694 | 36693.8 |
| abc transporter atp-binding protein | BST98_RS20470 | Not Available | Positive | 1358699 - 1359493 | 29933.3 |
| abc transporter substrate-binding protein | BST98_RS20475 | Not Available | Positive | 1359490 - 1360512 | 37887.0 |
| hypothetical protein | BST98_RS20480 | Not Available | Positive | 1360663 - 1361043 | 14370.6 |
| phosphorylase | BST98_RS20485 | Not Available | Positive | 1361067 - 1361873 | 30657.5 |
| arylesterase | BST98_RS20490 | Not Available | Negative | 1362425 - 1363027 | 22540.7 |
| abc transporter atp-binding protein | BST98_RS20495 | Not Available | Positive | 1363026 - 1363706 | 24437.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

