Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(sec) selenium transferase | BST98_RS20350 | Not Available | Positive | 1331282 - 1332709 | 52480.6 |
| selenocysteine-specific translation elongation factor | BST98_RS20355 | Not Available | Positive | 1332709 - 1334532 | 67331.1 |
| hypothetical protein | BST98_RS20360 | Not Available | Positive | 1334693 - 1335091 | 14112.5 |
| diguanylate cyclase | BST98_RS20365 | Not Available | Positive | 1335283 - 1336707 | 55755.6 |
| yoak family protein | BST98_RS20370 | Not Available | Negative | 1336788 - 1337438 | 23611.0 |
| 4fe-4s dicluster domain-containing protein | BST98_RS20375 | Not Available | Positive | 1337714 - 1338322 | 21251.6 |
| proton-conducting transporter membrane subunit | BST98_RS20380 | Not Available | Positive | 1338325 - 1340241 | 68390.0 |
| respiratory chain complex i subunit 1 family protein | BST98_RS20385 | Not Available | Positive | 1340241 - 1341194 | 34766.2 |
| nadh-quinone oxidoreductase subunit c | BST98_RS20390 | Not Available | Positive | 1341204 - 1342949 | 66231.4 |
| formate hydrogenlyase complex iron-sulfur subunit | BST98_RS20395 | Not Available | Positive | 1342959 - 1343507 | 20543.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

