Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit iib | BST98_RS20305 | Not Available | Negative | 1316878 - 1317195 | 11693.2 |
| llm class flavin-dependent oxidoreductase | BST98_RS20310 | Not Available | Negative | 1317495 - 1318526 | 39035.2 |
| nad(p)h-binding protein | BST98_RS20315 | Not Available | Positive | 1318875 - 1319726 | 31600.4 |
| uracil-dna glycosylase family protein | BST98_RS20320 | Not Available | Negative | 1319790 - 1320377 | 22410.5 |
| gh92 family glycosyl hydrolase | BST98_RS20325 | Not Available | Positive | 1320761 - 1323274 | 94490.9 |
| gh92 family glycosyl hydrolase | BST98_RS20330 | Not Available | Positive | 1323424 - 1326141 | 100979.0 |
| gnat family n-acetyltransferase | BST98_RS20335 | Not Available | Positive | 1326670 - 1327179 | 19319.2 |
| gh92 family glycosyl hydrolase | BST98_RS20340 | Not Available | Positive | 1327410 - 1329839 | 89936.9 |
| hypothetical protein | BST98_RS20345 | Not Available | Positive | 1330222 - 1330821 | 23370.1 |
| Trna-sec(p) | Not Available | Not Available | Positive | 1331086 - 1331177 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

