Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | BST98_RS20255 | Not Available | Negative | 1297983 - 1301921 | 143222.0 |
| membrane-bound lytic murein transglycosylase mltc | BST98_RS20260 | Not Available | Negative | 1302195 - 1303322 | 42720.7 |
| duf3943 domain-containing protein | BST98_RS20265 | Not Available | Negative | 1303442 - 1304773 | 50414.5 |
| terc family protein | BST98_RS20270 | Not Available | Positive | 1305058 - 1305822 | 28090.8 |
| cytochrome-c peroxidase | BST98_RS20275 | Not Available | Positive | 1306195 - 1307592 | 51751.2 |
| dsre family protein | BST98_RS20280 | Not Available | Negative | 1307653 - 1307982 | 12097.6 |
| abi family protein | BST98_RS20285 | Not Available | Negative | 1308159 - 1308482 | 12533.0 |
| aaa family atpase | BST98_RS20290 | Not Available | Positive | 1309344 - 1311944 | 96917.6 |
| hypothetical protein | BST98_RS20295 | Not Available | Positive | 1312404 - 1313942 | 60208.1 |
| phosphoenolpyruvate--protein phosphotransferase | BST98_RS20300 | Not Available | Negative | 1314353 - 1316854 | 92102.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

