Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | BST98_RS20150 | Not Available | Negative | 1267612 - 1268157 | 20816.1 |
| hypothetical protein | BST98_RS20155 | Not Available | Negative | 1268279 - 1268674 | 14384.0 |
| arac family transcriptional regulator | BST98_RS20160 | Not Available | Positive | 1268830 - 1269624 | 30610.1 |
| patatin-like phospholipase family protein | BST98_RS20165 | Not Available | Negative | 1269835 - 1272105 | 84135.4 |
| replication initiator protein rctb domain-containing protein | BST98_RS20170 | Not Available | Negative | 1272208 - 1274208 | 75946.4 |
| aaa family atpase | BST98_RS20175 | Not Available | Positive | 1275407 - 1276621 | 45941.2 |
| parb/repb/spo0j family partition protein | BST98_RS20180 | Not Available | Positive | 1276625 - 1277599 | 36241.0 |
| trna(met) cytidine acetyltransferase tmca | BST98_RS20185 | Not Available | Positive | 1277720 - 1279837 | 79591.2 |
| phosphatase | BST98_RS20190 | Not Available | Positive | 1279821 - 1280567 | 27262.1 |
| eal domain-containing protein | BST98_RS20195 | Not Available | Negative | 1281449 - 1283374 | 72845.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

