Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna glutamyl-q(34) synthetase gluqrs | BST98_RS02110 | Not Available | Negative | 429362 - 430252 | 33234.5 |
| rna polymerase-binding protein dksa | BST98_RS02115 | Not Available | Negative | 430518 - 430967 | 17151.4 |
| dna/rna nuclease sfsa | BST98_RS02120 | Not Available | Negative | 431097 - 431810 | 26633.7 |
| atp-dependent helicase hrpb | BST98_RS02125 | Not Available | Positive | 432034 - 434526 | 92520.8 |
| penicillin-binding protein 1b | BST98_RS02130 | Not Available | Positive | 434707 - 437250 | 94244.3 |
| Trna-thr | Not Available | Not Available | Positive | 437507 - 437582 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 437635 - 437710 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 437715 - 437790 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 437848 - 437923 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 437976 - 438051 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

