Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | BST98_RS20050 | Not Available | Negative | 1245441 - 1245974 | 20536.2 |
| m14 family metallocarboxypeptidase | BST98_RS20055 | Not Available | Positive | 1246324 - 1247247 | 34108.6 |
| class i sam-dependent methyltransferase | BST98_RS20060 | Not Available | Positive | 1247336 - 1248106 | 29497.2 |
| alpha,alpha-phosphotrehalase | BST98_RS20065 | Not Available | Negative | 1248127 - 1249809 | 65041.7 |
| pts trehalose transporter subunit iibc | BST98_RS20070 | Not Available | Negative | 1249868 - 1251322 | 52043.9 |
| inorganic diphosphatase | BST98_RS20075 | Not Available | Positive | 1251625 - 1252296 | 24396.9 |
| trehalose operon repressor trer | BST98_RS20080 | Not Available | Negative | 1252298 - 1253248 | 34607.7 |
| pts galactosamine/n-acetylgalactosamine transporter subunit iia | BST98_RS20085 | Not Available | Negative | 1253371 - 1253805 | 15452.8 |
| pts n-acetylgalactosamine transporter subunit iid | BST98_RS20090 | Not Available | Negative | 1253872 - 1254756 | 32091.9 |
| pts n-acetylgalactosamine transporter subunit iic | BST98_RS20095 | Not Available | Negative | 1254746 - 1255528 | 27455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

