Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS20000 | Not Available | Positive | 1234731 - 1235558 | 31049.1 |
| helix-turn-helix transcriptional regulator | BST98_RS20005 | Not Available | Positive | 1235706 - 1236722 | 38650.0 |
| eal domain-containing protein | BST98_RS20010 | Not Available | Positive | 1236926 - 1238098 | 44190.2 |
| acetate/propionate family kinase | BST98_RS20015 | Not Available | Negative | 1238732 - 1239925 | 43212.8 |
| enoyl-acp reductase fabv | BST98_RS20020 | Not Available | Positive | 1240229 - 1241431 | 44564.4 |
| catb-related o-acetyltransferase | BST98_RS20025 | Not Available | Negative | 1241483 - 1242139 | 24761.4 |
| hypothetical protein | BST98_RS20030 | Not Available | Positive | 1242222 - 1242677 | 17566.6 |
| had-ia family hydrolase | BST98_RS20035 | Not Available | Positive | 1242856 - 1243545 | 25469.5 |
| duf3302 domain-containing protein | BST98_RS20040 | Not Available | Positive | 1243807 - 1244196 | 15232.2 |
| hlyd family secretion protein | BST98_RS20045 | Not Available | Positive | 1244197 - 1245330 | 42191.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

