Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | BST98_RS19945 | Not Available | Positive | 1226459 - 1226974 | 18060.8 |
| f0f1 atp synthase subunit epsilon | BST98_RS19950 | Not Available | Negative | 1227376 - 1227816 | 15537.7 |
| f0f1 atp synthase subunit beta | BST98_RS19955 | Not Available | Negative | 1227827 - 1229212 | 49991.0 |
| f0f1 atp synthase subunit gamma | BST98_RS19960 | Not Available | Negative | 1229233 - 1230105 | 32449.1 |
| f0f1 atp synthase subunit alpha | BST98_RS19965 | Not Available | Negative | 1230149 - 1231690 | 55494.5 |
| f0f1 atp synthase subunit delta | BST98_RS19970 | Not Available | Negative | 1231703 - 1232251 | 20313.4 |
| f0f1 atp synthase subunit b | BST98_RS19975 | Not Available | Negative | 1232266 - 1232736 | 17726.3 |
| f0f1 atp synthase subunit c | BST98_RS19980 | Not Available | Negative | 1232785 - 1233021 | 7940.13 |
| f0f1 atp synthase subunit a | BST98_RS19985 | Not Available | Negative | 1233069 - 1233836 | 29146.7 |
| hypothetical protein | BST98_RS19990 | Not Available | Negative | 1233838 - 1234233 | 14575.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

