Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | BST98_RS19900 | Not Available | Positive | 1214336 - 1215094 | 30472.9 |
| ig-like domain-containing protein | BST98_RS19905 | Not Available | Negative | 1215270 - 1218143 | 104235.0 |
| hypothetical protein | BST98_RS19910 | Not Available | Negative | 1218161 - 1219276 | 41311.3 |
| hypothetical protein | BST98_RS19915 | Not Available | Negative | 1219242 - 1219958 | 27183.9 |
| cs1-pili formation c-terminal domain-containing protein | BST98_RS19920 | Not Available | Negative | 1219969 - 1222707 | 104261.0 |
| hypothetical protein | BST98_RS19925 | Not Available | Negative | 1222734 - 1223228 | 18451.1 |
| hypothetical protein | BST98_RS19930 | Not Available | Negative | 1223284 - 1223796 | 17555.5 |
| hypothetical protein | BST98_RS22400 | Not Available | Negative | 1224197 - 1224364 | 6574.09 |
| mate family efflux transporter | BST98_RS19935 | Not Available | Negative | 1224515 - 1225888 | 50214.2 |
| hypothetical protein | BST98_RS19940 | Not Available | Negative | 1225891 - 1226172 | 11246.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

