Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iib | BST98_RS19850 | Not Available | Negative | 1203979 - 1204479 | 18172.8 |
| sis domain-containing protein | BST98_RS19855 | Not Available | Negative | 1204498 - 1205670 | 43183.4 |
| tagatose-bisphosphate aldolase subunit kbaz | BST98_RS19860 | Not Available | Negative | 1205681 - 1206961 | 47220.8 |
| transcriptional repressor agar | BST98_RS19865 | Not Available | Negative | 1207011 - 1207787 | 28120.7 |
| sulfatase | BST98_RS19870 | Not Available | Positive | 1208207 - 1209760 | 59013.7 |
| oligogalacturonate-specific porin kdgm family protein | BST98_RS19875 | Not Available | Positive | 1209858 - 1210586 | 28615.4 |
| lyse family translocator | BST98_RS19880 | Not Available | Negative | 1210669 - 1211295 | 22937.8 |
| response regulator | BST98_RS19885 | Not Available | Positive | 1211446 - 1212666 | 45902.3 |
| diacylglycerol kinase | BST98_RS19890 | Not Available | Negative | 1212794 - 1213153 | 12772.0 |
| helix-turn-helix domain-containing protein | BST98_RS19895 | Not Available | Negative | 1213154 - 1214083 | 36200.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

