Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside phosphorylase | BST98_RS19800 | Not Available | Positive | 1195461 - 1196198 | 27121.5 |
| crp/fnr family transcriptional regulator | BST98_RS19805 | Not Available | Positive | 1196325 - 1197008 | 26365.8 |
| carbohydrate-binding family 9-like protein | BST98_RS19810 | Not Available | Negative | 1197066 - 1197785 | 27142.2 |
| glycoside hydrolase family 105 protein | BST98_RS19815 | Not Available | Negative | 1197854 - 1198897 | 39397.5 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | BST98_RS19820 | Not Available | Negative | 1198915 - 1199673 | 26896.1 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BST98_RS19825 | Not Available | Negative | 1199774 - 1200604 | 31097.1 |
| n-acetylglucosamine-6-phosphate deacetylase | BST98_RS19830 | Not Available | Negative | 1200637 - 1201791 | 41479.5 |
| pts galactosamine/n-acetylgalactosamine transporter subunit iia | BST98_RS19835 | Not Available | Negative | 1201793 - 1202236 | 15653.0 |
| pts system mannose/fructose/sorbose family transporter subunit iid | BST98_RS19840 | Not Available | Negative | 1202297 - 1203190 | 32112.9 |
| pts n-acetylgalactosamine transporter subunit iic | BST98_RS19845 | Not Available | Negative | 1203180 - 1203944 | 26893.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

