Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | BST98_RS19595 | Not Available | Positive | 1144010 - 1145974 | 72565.9 |
| duf808 domain-containing protein | BST98_RS19600 | Not Available | Negative | 1146038 - 1146934 | 31567.5 |
| lysr family transcriptional regulator | BST98_RS19605 | Not Available | Negative | 1147245 - 1148132 | 33304.4 |
| hlyd family secretion protein | BST98_RS19615 | Not Available | Positive | 1148532 - 1149440 | 33410.5 |
| fusc family protein | BST98_RS19620 | Not Available | Positive | 1149437 - 1151626 | 83374.1 |
| nucleoside hydrolase | BST98_RS19625 | Not Available | Negative | 1152170 - 1153144 | 35871.8 |
| isoaspartyl peptidase/l-asparaginase family protein | BST98_RS19630 | Not Available | Positive | 1153448 - 1154473 | 36227.1 |
| adenylosuccinate synthetase | BST98_RS19635 | Not Available | Negative | 1154570 - 1155826 | 45686.5 |
| lysr family transcriptional regulator | BST98_RS19640 | Not Available | Positive | 1155983 - 1156897 | 33958.2 |
| quaternary amine abc transporter atp-binding protein | BST98_RS19645 | Not Available | Negative | 1156963 - 1158240 | 47116.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

