Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BST98_RS02060 | Not Available | Positive | 420540 - 421577 | 38025.9 |
| tetr/acrr family transcriptional regulator | BST98_RS02065 | Not Available | Negative | 421651 - 422259 | 23286.9 |
| hypoxanthine phosphoribosyltransferase | BST98_RS02070 | Not Available | Positive | 422468 - 423004 | 20450.6 |
| carbonate dehydratase | BST98_RS02075 | Not Available | Negative | 423079 - 423750 | 24922.7 |
| abc transporter atp-binding protein | BST98_RS02080 | Not Available | Positive | 423849 - 424772 | 34371.8 |
| abc transporter permease | BST98_RS02085 | Not Available | Positive | 424769 - 425539 | 28061.1 |
| pantoate--beta-alanine ligase | BST98_RS02090 | Not Available | Negative | 425655 - 426545 | 33323.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BST98_RS02095 | Not Available | Negative | 426555 - 427349 | 28755.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BST98_RS02100 | Not Available | Negative | 427375 - 427860 | 17889.5 |
| polynucleotide adenylyltransferase pcnb | BST98_RS02105 | Not Available | Negative | 427857 - 429305 | 56192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

