Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | BST98_RS19545 | Not Available | Negative | 1131431 - 1132477 | 39951.1 |
| duf4056 domain-containing protein | BST98_RS19550 | Not Available | Negative | 1132593 - 1133672 | 39773.6 |
| bama/tama family outer membrane protein | BST98_RS19555 | Not Available | Negative | 1133684 - 1134778 | 41731.4 |
| hypothetical protein | BST98_RS19560 | Not Available | Negative | 1134824 - 1135690 | 31896.3 |
| duf3283 family protein | BST98_RS19565 | Not Available | Negative | 1135906 - 1136112 | 7771.17 |
| hypothetical protein | BST98_RS19570 | Not Available | Negative | 1136174 - 1136929 | 29294.0 |
| purine-nucleoside phosphorylase | BST98_RS19575 | Not Available | Positive | 1137502 - 1138212 | 25765.0 |
| lactate dehydrogenase | BST98_RS19580 | Not Available | Positive | 1138455 - 1139948 | 56928.0 |
| transaldolase | BST98_RS19585 | Not Available | Positive | 1140448 - 1141398 | 34810.6 |
| transketolase | BST98_RS19590 | Not Available | Positive | 1141497 - 1143491 | 72037.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

