Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BST98_RS19390 | Not Available | Positive | 1098017 - 1098949 | 34884.3 |
| nad/nadp-dependent octopine/nopaline dehydrogenase family protein | BST98_RS19395 | Not Available | Positive | 1099152 - 1100261 | 40229.4 |
| yfcc family protein | BST98_RS19400 | Not Available | Positive | 1100332 - 1101738 | 49998.7 |
| hypothetical protein | BST98_RS19405 | Not Available | Positive | 1102379 - 1102636 | 9867.77 |
| ig-like domain-containing protein | BST98_RS19410 | Not Available | Negative | 1103212 - 1105485 | 83920.1 |
| hypothetical protein | BST98_RS19415 | Not Available | Negative | 1105500 - 1106534 | 38197.4 |
| hypothetical protein | BST98_RS19420 | Not Available | Negative | 1106534 - 1107199 | 24977.1 |
| cs1-pili formation c-terminal domain-containing protein | BST98_RS19425 | Not Available | Negative | 1107278 - 1110031 | 104170.0 |
| hypothetical protein | BST98_RS19430 | Not Available | Negative | 1110028 - 1110579 | 21138.9 |
| hypothetical protein | BST98_RS19435 | Not Available | Negative | 1110634 - 1111197 | 19360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

