Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease family protein | BST98_RS19340 | Not Available | Negative | 1089093 - 1091465 | 88813.7 |
| hypothetical protein | BST98_RS19345 | Not Available | Negative | 1092086 - 1092790 | 26030.3 |
| hypothetical protein | BST98_RS19350 | Not Available | Negative | 1092812 - 1093153 | 12538.0 |
| mate family efflux transporter | BST98_RS19355 | Not Available | Positive | 1093424 - 1093807 | 13947.8 |
| hypothetical protein | BST98_RS19360 | Not Available | Negative | 1094121 - 1094468 | 12305.0 |
| hypothetical protein | BST98_RS19365 | Not Available | Negative | 1094503 - 1094847 | 12344.0 |
| hypothetical protein | BST98_RS19370 | Not Available | Negative | 1094998 - 1095363 | 12916.0 |
| 6-pyruvoyl trahydropterin synthase family protein | BST98_RS19375 | Not Available | Negative | 1095537 - 1096415 | 33017.2 |
| outer membrane beta-barrel protein | BST98_RS19380 | Not Available | Negative | 1096566 - 1097288 | 26351.8 |
| stas/sec14 domain-containing protein | BST98_RS19385 | Not Available | Negative | 1097452 - 1097832 | 14370.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

