Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BST98_RS19190 | Not Available | Negative | 1056552 - 1057436 | 33268.0 |
| iron-containing alcohol dehydrogenase | BST98_RS19195 | Not Available | Positive | 1057596 - 1058744 | 41759.7 |
| lysr family transcriptional regulator | BST98_RS19200 | Not Available | Negative | 1058800 - 1059702 | 33235.1 |
| peroxiredoxin-like family protein | BST98_RS19205 | Not Available | Positive | 1059878 - 1060420 | 20198.2 |
| alkene reductase | BST98_RS19210 | Not Available | Positive | 1060423 - 1061457 | 38927.4 |
| mpv17/pmp22 family protein | BST98_RS19215 | Not Available | Negative | 1061517 - 1062191 | 24831.1 |
| mfs transporter | BST98_RS19220 | Not Available | Negative | 1062178 - 1063449 | 46890.3 |
| amidohydrolase | BST98_RS19225 | Not Available | Negative | 1063460 - 1065205 | 64515.6 |
| mfs transporter | BST98_RS19230 | Not Available | Negative | 1065224 - 1066852 | 57134.5 |
| winged helix-turn-helix domain-containing protein | BST98_RS19235 | Not Available | Negative | 1067250 - 1068674 | 54261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

