Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BST98_RS19035 | Not Available | Negative | 1029029 - 1029346 | 11907.1 |
| hypothetical protein | BST98_RS19040 | Not Available | Negative | 1029494 - 1029820 | 12859.0 |
| hlyd family secretion protein | BST98_RS19045 | Not Available | Negative | 1030092 - 1031315 | 45400.9 |
| hypothetical protein | BST98_RS19050 | Not Available | Negative | 1031308 - 1031667 | 13391.3 |
| arac family transcriptional regulator | BST98_RS19055 | Not Available | Positive | 1031829 - 1032839 | 39033.3 |
| hypothetical protein | BST98_RS19060 | Not Available | Negative | 1032889 - 1033254 | 13864.6 |
| gmp reductase | BST98_RS19065 | Not Available | Positive | 1033798 - 1034841 | 37373.8 |
| dmt family transporter | BST98_RS19075 | Not Available | Positive | 1035661 - 1036599 | 34368.6 |
| voc family protein | BST98_RS19080 | Not Available | Positive | 1036775 - 1037260 | 18606.2 |
| duf2913 family protein | BST98_RS19085 | Not Available | Positive | 1037511 - 1038083 | 22030.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

