Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | BST98_RS18985 | Not Available | Negative | 1017180 - 1018166 | 37358.2 |
| undecaprenyl-phosphate glucose phosphotransferase | BST98_RS18990 | Not Available | Negative | 1018217 - 1019626 | 53192.8 |
| aaa family atpase | BST98_RS18995 | Not Available | Positive | 1019979 - 1020935 | 35572.1 |
| duf58 domain-containing protein | BST98_RS19000 | Not Available | Positive | 1020932 - 1021879 | 36228.5 |
| duf4381 domain-containing protein | BST98_RS19005 | Not Available | Positive | 1021876 - 1022358 | 18514.4 |
| vwa domain-containing protein | BST98_RS19010 | Not Available | Positive | 1022365 - 1023330 | 35913.0 |
| vwa domain-containing protein | BST98_RS19015 | Not Available | Positive | 1023323 - 1025188 | 69668.1 |
| batd family protein | BST98_RS19020 | Not Available | Positive | 1025195 - 1026904 | 62425.4 |
| serine/threonine transporter sstt | BST98_RS19025 | Not Available | Positive | 1027421 - 1028671 | 43198.6 |
| hypothetical protein | BST98_RS19030 | Not Available | Negative | 1028792 - 1028971 | 6792.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

