Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain Phdp Wu-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae strain Phdp Wu-1 chromosome 1, complete
Gene Summary
Adenine Count
929587 bp
Thymine Count
931950 bp
Guanine Count
663051 bp
Cytosine Count
665361 bp
Genome Length
3189949 bp
Protein-coding Genes
2659 genes
Non-Coding Genes
265 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | BST98_RS18775 | Not Available | Positive | 966235 - 968154 | 73053.6 |
| hypothetical protein | BST98_RS18785 | Not Available | Negative | 968751 - 969950 | 45437.1 |
| bacteriophage abortive infection abih family protein | BST98_RS18790 | Not Available | Negative | 970117 - 970980 | 33856.9 |
| dna-binding transcriptional regulator ycit | BST98_RS18795 | Not Available | Negative | 971264 - 972001 | 27051.6 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | BST98_RS18800 | Not Available | Negative | 972076 - 974499 | 89598.4 |
| glycyl-radical enzyme activating protein | BST98_RS18805 | Not Available | Negative | 974502 - 975443 | 35301.3 |
| fructose-6-phosphate aldolase | BST98_RS18810 | Not Available | Positive | 975689 - 976363 | 24166.3 |
| duf3427 domain-containing protein | BST98_RS18815 | Not Available | Negative | 977136 - 978527 | 53125.9 |
| hypothetical protein | BST98_RS18820 | Not Available | Negative | 978721 - 979266 | 21520.9 |
| dynamin family protein | BST98_RS18825 | Not Available | Negative | 979327 - 981636 | 86036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

